PhyloTree.TreeBuilding Namespace Reference

Classes
class	BirthDeathTree
	Contains methods to simulate birth-death trees. More...
class	CoalescentTree
	Contains methods to simulate coalescent trees. More...
class	DistanceMatrix
	Contains methods to compute distance matrices. More...
class	NeighborJoining
	Contains methods to compute neighbour-joining trees. More...
class	RandomTree
	Contains methods to generate random trees. More...
class	ThreadSafeRandom
	Represents a thread-safe random number generator. More...
class	UPGMA
	Contains methods to compute UPGMA trees. More...

Enumerations
enum	EvolutionModel
	The sequence evolution model used to compute the distance matrix from the alignment. More...
enum	AlignmentType
	The kind of sequences in the alignment. More...

Enumeration Type Documentation

AlignmentType

enum PhyloTree.TreeBuilding.AlignmentType

The kind of sequences in the alignment.

Definition at line 45 of file DistanceMatrix.cs.

EvolutionModel

enum PhyloTree.TreeBuilding.EvolutionModel

The sequence evolution model used to compute the distance matrix from the alignment.

Definition at line 11 of file DistanceMatrix.cs.